SMTL ID : 3ku0.2 (1 other biounit)

Structure of GAP31 with adenine at its binding pocket

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x ADE: ADENINE(Non-covalent)

ADE.1: 11 residues within 4Å: Chain A: V.73, Y.74, V.75, F.87, G.111, S.112, Y.113, I.161, S.165, E.166, R.169 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:V.75, A:V.75, A:R.169, A:R.169

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 7 residues within 4Å: Chain A: P.187, A.188, N.189, I.192, A.223, N.224, G.225 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:I.192 Hydrogen bonds: A:N.189

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, H.G. et al., A new activity of anti-HIV and anti-tumor protein GAP31: DNA adenosine glycosidase--structural and modeling insight into its functions. Biochem.Biophys.Res.Commun. (2010)

Release Date

2010-01-26

Peptides

Ribosome-inactivating protein gelonin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Ribosome-inactivating protein gelonin

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