SMTL ID : 3ku4.1 (1 other biounit)

Trapping of an oxocarbenium ion intermediate in UP crystals

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: G.59, S.60, R.63 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:G.59, A:S.60, A:S.60 Water bridges: A:S.60, A:R.63, A:R.63, A:T.140, A:T.140 Salt bridges: A:R.63 SO4.2: 3 residues within 4Å: Chain B: G.59, S.60, R.63 9 PLIP interactions: 8 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:G.59, B:S.60 Water bridges: B:R.63, B:R.63, B:R.63, B:R.63, B:R.63, A:R.93 Salt bridges: B:R.63

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Paul, D. et al., Glycal formation in crystals of uridine phosphorylase. Biochemistry (2010)

Release Date

2010-04-28

Peptides

Uridine phosphorylase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Uridine phosphorylase

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