SMTL ID : 3kvo.3 (2 other biounits)

Crystal structure of the catalytic domain of human Hydroxysteroid dehydrogenase like 2 (HSDL2)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

homo-dimer

Ligands

4 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 28 residues within 4Å: Chain A: G.52, S.54, R.55, G.56, I.57, A.76, K.77, T.78, L.85, V.108, D.109, V.110, N.136, A.137, S.138, V.159, I.186, Y.203, K.207, W.231, P.232, A.235, I.236, T.238, A.240, M.241, D.306 Ligands: NAP.2 27 PLIP interactions: 27 interactions with chain A Hydrophobic interactions: A:P.232 Hydrogen bonds: A:G.52, A:S.54, A:S.54, A:R.55, A:R.55, A:I.57, A:K.77, A:T.78, A:D.109, A:V.110, A:N.136, A:S.138, A:S.138, A:K.207, A:I.236, A:I.236, A:T.238, A:T.238 Water bridges: A:R.55, A:G.58, A:K.77, A:N.136 Salt bridges: A:R.55, A:K.77 pi-Stacking: A:W.231 pi-Cation interactions: A:K.77 NAP.2: 8 residues within 4Å: Chain A: K.77, R.111, A.139, K.151, R.152, L.155, V.159 Ligands: NAP.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.152 Salt bridges: A:R.111, A:K.151 NAP.3: 28 residues within 4Å: Chain B: G.52, S.54, R.55, G.56, I.57, A.75, A.76, K.77, T.78, V.108, D.109, V.110, N.136, A.137, S.138, V.159, I.186, Y.203, K.207, W.231, P.232, A.235, I.236, T.238, A.240, M.241, D.306 Ligands: NAP.4 26 PLIP interactions: 26 interactions with chain B Hydrophobic interactions: B:W.231, B:P.232 Hydrogen bonds: B:S.54, B:S.54, B:R.55, B:R.55, B:R.55, B:I.57, B:K.77, B:T.78, B:D.109, B:V.110, B:N.136, B:S.138, B:K.207, B:I.236, B:I.236, B:T.238, B:T.238 Water bridges: B:G.58, B:K.77, B:N.136, B:Y.203 Salt bridges: B:R.55, B:K.77 pi-Cation interactions: B:K.77 NAP.4: 6 residues within 4Å: Chain B: K.77, D.109, R.111, R.152, L.155 Ligands: NAP.3 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.152 Water bridges: B:K.77 Salt bridges: B:R.111

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ugochukwu, E. et al., Crystal structure of the catalytic domain of human Hydroxysteroid dehydrogenase like 2 (HSDL2). To be Published

Release Date

2010-03-09

Peptides

Hydroxysteroid dehydrogenase-like protein 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Hydroxysteroid dehydrogenase-like protein 2

Related Entries With Identical Sequence