SMTL ID : 3kwm.2 (1 other biounit)

Crystal structure of ribose-5-isomerase A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.32 Å

Oligo State

homo-dimer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1: 4 residues within 4Å: Chain A: V.198, V.199 Chain B: V.198, V.199 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:V.199

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 5 residues within 4Å: Chain A: K.13, G.35, S.36, T.37, K.127 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:S.36, A:T.37, A:T.37, A:T.37 Water bridges: A:K.13, A:T.37, A:V.38, A:G.88, A:A.89, A:K.127 Salt bridges: A:K.13, A:K.127

4 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 4 residues within 4Å: Chain B: A.104, T.166, I.167, D.169 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:D.169, B:D.169 Water bridges: B:T.166 PEG.4: 5 residues within 4Å: Chain B: G.39, I.42, E.43, K.65, A.68 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.43 Water bridges: B:G.39, B:E.43 PEG.5: 1 residues within 4Å: Chain B: S.36 1 PLIP interactions: 1 interactions with chain B Water bridges: B:S.36 PEG.6: 1 residues within 4Å: Chain B: N.134 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.134 Water bridges: B:F.135

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

 - 

Release Date

2010-01-05

Peptides

Ribose-5-phosphate isomerase A: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

Ribose-5-phosphate isomerase A

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