SMTL ID : 3kxq.1

Crystal structure of triosephosphate isomerase from bartonella henselae at 1.6A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-dimer

Ligands

2 x NO3: NITRATE ION(Non-functional Binders)

NO3.1: 6 residues within 4Å: Chain A: N.33, K.35, H.120, L.254, I.255, G.256 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:N.33, A:K.35 Water bridges: A:K.35, A:E.122, A:E.190, A:E.190, A:G.256, A:G.256, A:G.257 NO3.4: 7 residues within 4Å: Chain B: N.33, K.35, H.120, G.233, L.254, I.255, G.256 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:N.33, B:K.35, B:H.120, B:I.255 Water bridges: B:G.256, B:G.256

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: A.211, H.214, H.215, H.249 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.211, A:H.215 EDO.3: 6 residues within 4Å: Chain A: W.34, N.37, G.38, S.42, L.260, K.261 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.42, A:K.261, A:K.261 Water bridges: A:G.38, A:S.42 EDO.5: 8 residues within 4Å: Chain A: G.101, D.102, R.123, Y.127 Chain B: G.101, D.102, R.123, Y.127 8 PLIP interactions: 4 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:D.102, A:R.123, A:R.123, B:D.102, B:R.123, B:R.123 Water bridges: A:N.90, B:N.90 EDO.6: 6 residues within 4Å: Chain B: W.34, N.37, G.38, S.42, L.260, K.261 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:S.42, B:K.261, B:K.261 Water bridges: B:G.38

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Seattle Structural Genomics Center for Infectious Disease (SSGCID) et al., Crystal structure of triosephosphate isomerase from bartonella henselae at 1.6A resolution. To be Published

Release Date

2009-12-22

Peptides

Triosephosphate isomerase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Triosephosphate isomerase