SMTL ID : 3l0s.1 (1 other biounit)

Crystal structures of Zinc, Cobalt and Iron containing Adenylate kinase from Gram-negative bacteria Desulfovibrio gigas

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x CO: COBALT (II) ION(Non-covalent)

CO.1: 4 residues within 4Å: Chain A: C.129, H.135, C.151, C.154 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.129, A:H.135, A:C.151, A:C.154

1 x TAR: D(-)-TARTARIC ACID(Non-covalent)

TAR.2: 7 residues within 4Å: Chain A: P.8, N.9, G.10, S.11, G.12, K.13, R.126 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:G.10, A:S.11, A:G.12, A:K.13, A:R.126 Water bridges: A:N.9, A:G.14, A:G.14, A:G.14 Salt bridges: A:K.13, A:R.126

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mukhopadhyay, A. et al., Crystal structure of the zinc-, cobalt-, and iron-containing adenylate kinase from Desulfovibrio gigas: a novel metal-containing adenylate kinase from Gram-negative bacteria. J.Biol.Inorg.Chem. (2011)

Release Date

2010-12-15

Peptides

Adenylate kinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Adenylate kinase

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