SMTL ID : 3l6o.1

Crystal Structure of Phosphate bound apo Glyceraldehyde-3-phosphate dehydrogenase 1 from MRSA252 at 2.2 Angstrom resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-tetramer

Ligands

4 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 7 residues within 4Å: Chain A: S.150, C.151, T.152, H.178, T.211, G.212, R.234 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:C.151, A:T.152, A:T.152, A:T.211, A:T.211, A:G.212, A:R.234 Salt bridges: A:H.178 PO4.2: 7 residues within 4Å: Chain B: S.150, C.151, T.152, H.178, T.211, G.212, R.234 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:S.150, B:C.151, B:T.152, B:T.152, B:T.152, B:T.211, B:G.212, B:R.234 Salt bridges: B:H.178 PO4.3: 7 residues within 4Å: Chain C: S.150, C.151, T.152, H.178, T.211, G.212, R.234 9 PLIP interactions: 9 interactions with chain C Hydrogen bonds: C:S.150, C:C.151, C:T.152, C:T.152, C:T.152, C:T.211, C:G.212, C:R.234 Salt bridges: C:H.178 PO4.4: 7 residues within 4Å: Chain D: S.150, C.151, T.152, H.178, T.211, G.212, R.234 11 PLIP interactions: 11 interactions with chain D Hydrogen bonds: D:S.150, D:C.151, D:T.152, D:T.152, D:T.152, D:T.211, D:G.212, D:R.234 Water bridges: D:H.178, D:S.210 Salt bridges: D:H.178

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mukherjee, S. et al., Crystal structure of glyceraldehyde-3-phosphate dehydrogenase 1 from methicillin-resistant Staphylococcus aureus MRSA252 provides novel insights into substrate binding and catalytic mechanism. J.Mol.Biol. (2010)

Release Date

2010-08-18

Peptides

Glyceraldehyde-3-phosphate dehydrogenase 1: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
Q

B
P

C
R

D
O

Glyceraldehyde-3-phosphate dehydrogenase 1

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