SMTL ID : 3l7u.1

Crystal structure of human NM23-H1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-hexamer

Ligands

4 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 3 residues within 4Å: Chain B: R.108, T.114, H.138 5 PLIP interactions: 5 interactions with chain B Water bridges: B:I.137, B:G.139, B:D.141 Salt bridges: B:R.108, B:H.138 PO4.2: 7 residues within 4Å: Chain B: R.38 Chain C: C.165, A.166 Chain D: C.165, A.166 Chain F: Q.37, R.38 6 PLIP interactions: 2 interactions with chain C, 4 interactions with chain F Water bridges: C:S.164, C:S.164, F:Q.37, F:R.38, F:R.38 Hydrogen bonds: F:R.38 PO4.3: 3 residues within 4Å: Chain E: R.108, T.114, H.138 6 PLIP interactions: 6 interactions with chain E Hydrogen bonds: E:T.114 Water bridges: E:I.137, E:G.139, E:D.141 Salt bridges: E:R.108, E:H.138 PO4.4: 7 residues within 4Å: Chain A: C.165, A.166 Chain C: Q.37, R.38 Chain E: R.38 Chain F: C.165, A.166 6 PLIP interactions: 4 interactions with chain C, 2 interactions with chain F Hydrogen bonds: C:R.38 Water bridges: C:Q.37, C:R.38, C:R.38, F:S.164, F:S.164

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Han, B.G. et al., Refined Structure of Human NM23-H1 from a Hexagonal Crystal. BULL.KOREAN CHEM.SOC. (2010)

Release Date

2010-11-10

Peptides

Nucleoside diphosphate kinase A: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
A

E
B

F
C

Nucleoside diphosphate kinase A

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