SMTL ID : 3lag.1

The crystal structure of a functionally unknown protein RPA4178 from Rhodopseudomonas palustris CGA009

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.15 Å

Oligo State

homo-dimer

Ligands

2 x NI: NICKEL (II) ION(Non-covalent)

NI.1: 4 residues within 4Å: Chain A: H.33, H.35, H.77 Ligands: FMT.3 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.33, A:H.35, A:H.77, H2O.16 NI.4: 4 residues within 4Å: Chain B: H.33, H.35, H.77 Ligands: FMT.5 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.33, B:H.35, B:H.77, H2O.323

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 3 residues within 4Å: Chain A: D.15, E.16 Chain B: D.38 5 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: A:D.15, A:E.16, B:D.38, H2O.338, H2O.348

3 x FMT: FORMIC ACID(Non-functional Binders)

FMT.3: 7 residues within 4Å: Chain A: H.33, H.35, Y.39, H.77, V.79, E.91 Ligands: NI.1 No protein-ligand interaction detected (PLIP) FMT.5: 7 residues within 4Å: Chain B: H.33, H.35, Y.39, H.77, V.79, E.91 Ligands: NI.4 No protein-ligand interaction detected (PLIP) FMT.6: 8 residues within 4Å: Chain A: N.14, D.15, E.16 Chain B: D.38, Y.39, A.70, R.71, K.72 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:N.14, B:R.71 Water bridges: B:K.72

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tan, K. et al., The crystal structure of a functionally unknown protein RPA4178 from Rhodopseudomonas palustris CGA009. To be Published

Release Date

2010-01-19

Peptides

uncharacterized protein RPA4178: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

uncharacterized protein RPA4178