SMTL ID : 3lfu.1

Crystal Structure of E. coli UvrD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: A.31, G.32, Q.251, R.284, G.564, R.605 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:G.32, A:Q.251 Water bridges: A:S.33, A:G.564, A:G.564, A:R.605 Salt bridges: A:R.284, A:R.605 SO4.2: 3 residues within 4Å: Chain A: T.63, N.64, K.65 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.64, A:K.65 Water bridges: A:T.63, A:T.63, A:N.64 SO4.3: 5 residues within 4Å: Chain A: G.34, K.35, T.36, R.37, R.73 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:T.36, A:T.36, A:R.37 Water bridges: A:G.34, A:G.34, A:T.36, A:T.36, A:R.37, A:R.73 Salt bridges: A:R.73 SO4.4: 2 residues within 4Å: Chain A: K.135, R.460 6 PLIP interactions: 6 interactions with chain A Water bridges: A:R.416, A:R.416, A:R.416, A:S.488 Salt bridges: A:K.135, A:R.460

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jia, H. et al., Rotations of the 2B sub-domain of E. coli UvrD helicase/translocase coupled to nucleotide and DNA binding. J.Mol.Biol. (2011)

Release Date

2011-02-02

Peptides

DNA helicase II: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA helicase II