SMTL ID : 3lh0.1 (1 other biounit)

Crystal structure of the 53BP1 tandem tudor domain in complex with p53K372me2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-2-2-mer

Ligands

4 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.1: 6 residues within 4Å: Chain A: Q.121, Y.122 Chain C: L.56, Q.121, Y.122 Ligands: PGE.4 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.121 PGE.2: 3 residues within 4Å: Chain A: E.86, Y.91, W.102 No protein-ligand interaction detected (PLIP) PGE.4: 6 residues within 4Å: Chain A: L.56, Q.121, Y.122 Chain C: Q.121, Y.122 Ligands: PGE.1 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:Q.121 PGE.5: 3 residues within 4Å: Chain C: E.86, Y.91, W.102 No protein-ligand interaction detected (PLIP)

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 7 residues within 4Å: Chain A: K.81, E.95, R.100 Chain C: K.85, E.86, S.87, G.88 6 PLIP interactions: 4 interactions with chain A, 2 interactions with chain C Water bridges: A:K.81, A:K.81 Salt bridges: A:K.81, A:R.100 Hydrogen bonds: C:S.87, C:G.88 SO4.6: 7 residues within 4Å: Chain A: K.85, E.86, S.87, G.88 Chain C: K.81, E.95, R.100 6 PLIP interactions: 2 interactions with chain A, 4 interactions with chain C Hydrogen bonds: A:S.87, A:G.88 Water bridges: C:K.81, C:K.81 Salt bridges: C:K.81, C:R.100

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Roy, S. et al., Structural insight into p53 recognition by the 53BP1 tandem Tudor domain. J.Mol.Biol. (2010)

Release Date

2010-03-23

Peptides

Tumor suppressor p53-binding protein 1: AC
DIMETHYLATED p53 LYSINE 372 PEPTIDE: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
B

D
B

Tumor suppressor p53-binding protein 1

DIMETHYLATED p53 LYSINE 372 PEPTIDE

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