SMTL ID : 3lhn.1 (1 other biounit)

Crystal structure of putative lipoprotein (NP_718719.1) from Shewanella oneidensis at 1.42 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.42 Å

Oligo State

homo-tetramer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: N.109, R.110 Chain B: K.66 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:R.110 Water bridges: A:G.108 Salt bridges: B:K.66 SO4.4: 3 residues within 4Å: Chain C: N.109, R.110 Chain D: K.66 3 PLIP interactions: 2 interactions with chain C, 1 interactions with chain D Hydrogen bonds: C:R.110 Water bridges: C:G.108 Salt bridges: D:K.66

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain A: V.36, L.37, P.38, E.43, G.44, H.118 Chain B: L.115 5 PLIP interactions: 4 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:L.37, A:E.43, A:H.118 Water bridges: A:V.36, B:G.114 GOL.3: 7 residues within 4Å: Chain A: G.114, L.115 Chain B: V.36, L.37, P.38, E.43, H.118 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:L.37, A:G.114 GOL.5: 7 residues within 4Å: Chain C: V.36, L.37, P.38, E.43, G.44, H.118 Chain D: L.115 4 PLIP interactions: 3 interactions with chain C, 1 interactions with chain D Hydrogen bonds: C:L.37, C:E.43, C:H.118 Water bridges: D:G.114 GOL.6: 7 residues within 4Å: Chain C: G.114, L.115 Chain D: V.36, L.37, P.38, E.43, H.118 3 PLIP interactions: 2 interactions with chain D, 1 interactions with chain C Hydrogen bonds: D:L.37, D:H.118, C:G.114

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of putative lipoprotein (NP_718719.1) from Shewanella oneidensis at 1.42 A resolution. To be published

Release Date

2010-02-23

Peptides

Lipoprotein: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Lipoprotein

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