SMTL ID : 3lim.1 (5 other biounits)

Crystal structure of the pore forming toxin frac from sea anemone actinia fragacea

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

3 x LDA: LAURYL DIMETHYLAMINE-N-OXIDE(Non-covalent)

LDA.1: 7 residues within 4Å: Chain A: R.52, Y.112, Q.129, Y.132, Y.136, Y.137 Ligands: LDA.2 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:R.52, A:Y.112, A:Y.112, A:Y.132, A:Y.136 Hydrogen bonds: A:R.52 LDA.2: 5 residues within 4Å: Chain A: Y.50, F.51, R.52, Q.129 Ligands: LDA.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:F.51 LDA.3: 2 residues within 4Å: Chain A: N.110, W.111 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:N.110, A:W.111, A:W.111

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mechaly, A.E. et al., Structural insights into the oligomerization and architecture of eukaryotic membrane pore-forming toxins. Structure (2011)

Release Date

2010-12-15

Peptides

Fragaceatoxin C: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fragaceatoxin C

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