SMTL ID : 3ljq.1

Crystal Structure of the Glycosylasparaginase T152C apo-precursor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 7 residues within 4Å: Chain A: V.46, E.47, D.49, E.52, V.55, G.56, Y.57 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.49, A:E.52 NA.3: 7 residues within 4Å: Chain B: V.46, E.47, D.49, E.52, V.55, G.56, Y.57 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.47, B:D.49, B:E.52

1 x GLY: GLYCINE(Non-covalent)

GLY.2: 9 residues within 4Å: Chain B: D.155, T.174, G.176, R.184, G.186, D.187, S.188, G.208, G.210 8 PLIP interactions: 7 interactions with chain B, 1 Ligand-Ligand interactions Hydrogen bonds: B:D.155, B:G.208, B:G.208, B:G.208, B:G.210, G.2 Water bridges: B:G.186 Salt bridges: B:R.184

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, Y. et al., Crystallographic snapshot of glycosylasparaginase precursor poised for autoprocessing. J.Mol.Biol. (2010)

Release Date

2010-11-24

Peptides

N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase