SMTL ID : 3lk7.1

The Crystal Structure of UDP-N-acetylmuramoylalanine-D-glutamate (MurD) ligase from Streptococcus agalactiae to 1.5A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: S.120, N.121, G.122, K.123, T.124 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:G.122, A:K.123, A:T.124, A:T.124 Water bridges: A:G.122, A:R.313, A:R.313, A:R.313 Salt bridges: A:K.123 SO4.2: 3 residues within 4Å: Chain A: S.296, N.297, Q.298 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.297, A:N.297, A:N.297, A:Q.298, A:Q.298

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 4 residues within 4Å: Chain A: R.19, W.428, N.433, F.434 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stein, A.J. et al., The Crystal Structure of UDP-N-acetylmuramoylalanine-D-glutamate (MurD) ligase from Streptococcus agalactiae to 1.5A. To be Published

Release Date

2010-02-09

Peptides

UDP-N-acetylmuramoylalanine--D-glutamate ligase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UDP-N-acetylmuramoylalanine--D-glutamate ligase