SMTL ID : 3lll.1

Crystal structure of mouse pacsin2 F-BAR domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

homo-dimer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: V.55, E.56, G.58, Q.60, Y.61, E.65 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:V.55, A:Q.60 CA.6: 6 residues within 4Å: Chain B: V.55, E.56, G.58, Q.60, Y.61, E.65 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:V.55, B:G.58

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: L.268, R.269, R.272 Chain B: Q.219 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:Q.219 Salt bridges: A:R.269, A:R.272 SO4.3: 2 residues within 4Å: Chain A: R.230 Chain B: K.260 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Salt bridges: A:R.230, B:K.260 SO4.4: 2 residues within 4Å: Chain A: R.124, K.128 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.124 SO4.5: 2 residues within 4Å: Chain A: K.260 Chain B: R.230 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Salt bridges: B:R.230, A:K.260 SO4.7: 4 residues within 4Å: Chain B: Q.217, Q.220, F.221, K.224 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Q.217, B:Q.220 Salt bridges: B:K.224 SO4.8: 3 residues within 4Å: Chain A: R.11 Chain B: Y.61, H.275 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Salt bridges: B:H.275 Hydrogen bonds: A:R.11

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.9: 1 residues within 4Å: Chain B: M.109 Ligand excluded by PLIP CL.10: 1 residues within 4Å: Chain B: K.107 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Plomann, M. et al., A hinge in the distal end of the PACSIN 2 F-BAR domain may contribute to membrane-curvature sensing. J.Mol.Biol. (2010)

Release Date

2010-05-26

Peptides

Protein kinase C and casein kinase substrate in neurons protein 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Protein kinase C and casein kinase substrate in neurons protein 2