SMTL ID : 3lls.1

Crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase from Mycobacterium tuberculosis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

9 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: S.103, G.135, R.136, R.175 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.103, A:R.136 Salt bridges: A:R.175 SO4.2: 6 residues within 4Å: Chain A: G.241, R.244, G.245, I.246, G.247, N.316 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.244, A:I.246, A:G.247, A:N.316 SO4.3: 2 residues within 4Å: Chain A: R.160 Chain B: Q.393 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:Q.393 Salt bridges: A:R.160 SO4.4: 2 residues within 4Å: Chain A: R.244, G.245 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.245 Salt bridges: A:R.244 SO4.5: 2 residues within 4Å: Chain A: S.152, T.153 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.153 Water bridges: A:T.153, A:N.154 SO4.7: 4 residues within 4Å: Chain B: S.103, G.135, R.136, R.175 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:S.103, B:R.136 Salt bridges: B:R.175 SO4.8: 6 residues within 4Å: Chain B: G.241, R.244, G.245, I.246, G.247, N.316 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:R.244, B:I.246, B:G.247, B:N.316 SO4.9: 3 residues within 4Å: Chain A: I.389, Q.393 Chain B: R.160 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:Q.393 Salt bridges: B:R.160 SO4.10: 2 residues within 4Å: Chain B: R.244, G.245 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.244, B:G.245

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.6: 5 residues within 4Å: Chain A: G.462, N.463, V.464 Chain B: V.214, S.216 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.464, A:V.464 EDO.11: 5 residues within 4Å: Chain A: V.214, S.216 Chain B: G.462, N.463, V.464 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:V.464, B:V.464

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Baugh, L. et al., Increasing the structural coverage of tuberculosis drug targets. Tuberculosis (Edinb) (2015)

Release Date

2010-02-16

Peptides

3-ketoacyl-(Acyl-carrier-protein) reductase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

3-ketoacyl-(Acyl-carrier-protein) reductase