SMTL ID : 3lnv.1

The crystal structure of fatty acyl-adenylate ligase from L. pneumophila in complex with acyl adenylate and pyrophosphate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x 1ZZ: 5'-O-[(S)-(dodecanoyloxy)(hydroxy)phosphoryl]adenosine(Non-covalent)

1ZZ.1: 24 residues within 4Å: Chain A: S.176, I.199, F.203, M.205, D.220, M.221, G.225, F.295, A.298, E.299, P.300, V.301, C.326, Y.327, G.328, L.329, A.330, L.334, L.335, S.376, D.442, V.453, R.456 Ligands: POP.2 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:I.199, A:F.203, A:F.203, A:F.295, A:A.298, A:L.334, A:L.334, A:L.335 Hydrogen bonds: A:S.176, A:D.220, A:D.220, A:A.298, A:C.326, A:G.328, A:A.330, A:S.376, A:D.442, A:R.456 Water bridges: A:V.301, A:V.301 pi-Stacking: A:Y.327

1 x POP: PYROPHOSPHATE 2-(Non-covalent)

POP.2: 7 residues within 4Å: Chain A: T.175, S.176, G.177, S.178, E.331, R.456 Ligands: 1ZZ.1 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.176, A:G.177, A:G.177, A:G.177, A:E.331, A:R.456

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Z. et al., Structural and Functional Studies of Fatty Acyl Adenylate Ligases from E. coli and L. pneumophila. J.Mol.Biol. (2011)

Release Date

2010-04-07

Peptides

Saframycin Mx1 synthetase B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Saframycin Mx1 synthetase B

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