SMTL ID : 3lo1.1

Crystal structure of human alpha-defensin 1 (Y16A mutant)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x PG0: 2-(2-METHOXYETHOXY)ETHANOL(Non-functional Binders)

PG0.1: 3 residues within 4Å: Chain A: C.2, C.4, F.28 No protein-ligand interaction detected (PLIP)

2 x AZI: AZIDE ION(Non-covalent)

AZI.2: 3 residues within 4Å: Chain A: G.23, R.24, L.25 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.25, A:L.25 Water bridges: A:R.24 AZI.3: 6 residues within 4Å: Chain A: A.1, Y.3, R.5, E.13, C.29, C.30 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:A.1, A:A.1, A:R.5, A:E.13, A:C.30

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wei, G. et al., Trp-26 imparts functional versatility to human alpha-defensin HNP1. J.Biol.Chem. (2010)

Release Date

2010-03-09

Peptides

Neutrophil defensin 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Neutrophil defensin 1