SMTL ID : 3lo6.3 (2 other biounits)

Crystal structure of human alpha-defensin 1 (W26Aba mutant)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.56 Å

Oligo State

homo-dimer

Ligands

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 5 residues within 4Å: Chain A: F.28 Chain B: C.4, I.6, Y.21, A.26 5 PLIP interactions: 3 interactions with chain B, 2 interactions with chain A Hydrophobic interactions: B:Y.21, A:F.28, A:F.28 Hydrogen bonds: B:C.4, B:I.6

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 1 residues within 4Å: Chain B: P.7 Ligand excluded by PLIP CL.3: 3 residues within 4Å: Chain B: A.8, C.9, R.15 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wei, G. et al., Trp-26 imparts functional versatility to human alpha-defensin HNP1. J.Biol.Chem. (2010)

Release Date

2010-03-09

Peptides

Neutrophil defensin 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Neutrophil defensin 1

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