SMTL ID : 3loc.2 (1 other biounit)

Crystal structure of putative transcriptional regulator ycdc

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x URA: URACIL(Non-covalent)

URA.1: 8 residues within 4Å: Chain A: L.74, W.77, K.101, F.115, W.167, Q.171 Chain B: F.176, Q.179 7 PLIP interactions: 6 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:K.101, A:Q.171, A:Q.171, B:Q.179 pi-Stacking: A:W.77, A:W.167, A:W.167 URA.2: 9 residues within 4Å: Chain A: F.176, Q.179 Chain B: L.74, W.77, L.78, K.101, F.115, W.167, Q.171 9 PLIP interactions: 1 interactions with chain A, 8 interactions with chain B Hydrogen bonds: A:Q.179, B:K.101, B:Q.171, B:Q.171 Hydrophobic interactions: B:W.77, B:L.78 pi-Stacking: B:W.77, B:W.167, B:W.167

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Patskovsky, Y.V. et al., Crystal Structure of Hypothetical Transcriptional Regulator Ycdc from Escherichia Coli. To be Published

Release Date

2010-03-16

Peptides

HTH-type transcriptional regulator rutR: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

HTH-type transcriptional regulator rutR

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