SMTL ID : 3lp9.1 (1 other biounit)

Crystal structure of LS24, A Seed Albumin from Lathyrus sativus

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: T.1, N.7, D.65, D.121, D.175 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:N.7, A:D.65, A:D.121, A:D.175, H2O.1 CA.4: 5 residues within 4Å: Chain B: T.1, N.7, D.65, D.121, D.175 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:N.7, B:D.65, B:D.121, B:D.175, H2O.7

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: A.9, S.67, A.123, A.177 Ligand excluded by PLIP CL.5: 5 residues within 4Å: Chain B: A.9, S.67, A.122, A.123, A.177 Ligand excluded by PLIP

2 x NA: SODIUM ION(Non-functional Binders)

NA.3: 5 residues within 4Å: Chain A: D.69, Y.124, R.125, F.178, A.179 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.69, A:R.125, A:A.179 NA.6: 5 residues within 4Å: Chain B: D.69, Y.124, R.125, F.178, A.179 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:D.69, B:R.125, B:A.179

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gaur, V. et al., Crystal structure and functional insights of hemopexin fold protein from grass pea. Plant Physiol. (2010)

Release Date

2010-02-23

Peptides

LS-24: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

LS-24

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