SMTL ID : 3lwb.1

Crystal Structure of apo D-alanine:D-alanine Ligase (Ddl) from Mycobacterium tuberculosis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x NO3: NITRATE ION(Non-functional Binders)

NO3.1: 7 residues within 4Å: Chain A: F.273, R.316, P.335, G.336, S.341, M.342, Y.343 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.316, A:G.336, A:M.342, A:Y.343 Water bridges: A:N.332, A:M.334 NO3.2: 7 residues within 4Å: Chain B: F.273, R.316, P.335, G.336, S.341, M.342, Y.343 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:R.316, B:G.336, B:M.342, B:Y.343 Water bridges: B:S.341

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bruning, J.B. et al., Structure of the Mycobacterium tuberculosis D-Alanine:D-Alanine Ligase, a Target of the Antituberculosis Drug D-Cycloserine. Antimicrob.Agents Chemother. (2011)

Release Date

2010-03-09

Peptides

D-alanine--D-alanine ligase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

D-alanine--D-alanine ligase