SMTL ID : 3lx7.1

Crystal structure of a Novel Tudor domain-containing protein SGF29

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.78 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: K.98, A.161, Q.162, R.163 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.163 Water bridges: A:Q.162, A:Q.162 Salt bridges: A:K.98 SO4.6: 4 residues within 4Å: Chain B: K.98, A.161, Q.162, R.163 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:R.163 Water bridges: B:Q.162, B:Q.162 Salt bridges: B:K.98

8 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.2: 4 residues within 4Å: Chain A: A.28, P.30, F.109, A.167 No protein-ligand interaction detected (PLIP) UNX.3: 2 residues within 4Å: Chain A: L.158, N.159 No protein-ligand interaction detected (PLIP) UNX.4: 1 residues within 4Å: Chain A: Q.121 No protein-ligand interaction detected (PLIP) UNX.5: 2 residues within 4Å: Chain A: P.120, Q.121 No protein-ligand interaction detected (PLIP) UNX.7: 4 residues within 4Å: Chain B: A.28, P.30, F.109, A.167 No protein-ligand interaction detected (PLIP) UNX.8: 2 residues within 4Å: Chain B: L.158, N.159 No protein-ligand interaction detected (PLIP) UNX.9: 1 residues within 4Å: Chain B: Q.121 No protein-ligand interaction detected (PLIP) UNX.10: 2 residues within 4Å: Chain B: P.120, Q.121 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bian, C. et al., Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation. Embo J. (2011)

Release Date

2010-05-05

Peptides

SAGA-associated factor 29 homolog: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

SAGA-associated factor 29 homolog