SMTL ID : 3m0w.3 (5 other biounits)

Structure of S100A4 with PCP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-dimer

Ligands

2 x P77: 2-chloro-10-[3-(4-methylpiperazin-1-yl)propyl]-10H-phenothiazine(Non-covalent)

P77.1: 3 residues within 4Å: Chain A: D.9, S.13 Chain B: F.88 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:S.13 Salt bridges: A:D.9, A:D.9 Hydrophobic interactions: B:F.88, B:F.88 P77.4: 3 residues within 4Å: Chain A: F.88 Chain B: D.9, S.13 5 PLIP interactions: 2 interactions with chain A, 3 interactions with chain B Hydrophobic interactions: A:F.88, A:F.88 Hydrogen bonds: B:S.13 Salt bridges: B:D.9, B:D.9

4 x CA: CALCIUM ION(Non-covalent)

CA.2: 7 residues within 4Å: Chain A: S.19, G.20, K.21, E.22, D.24, K.27, E.32 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:S.19, A:E.22, A:D.24, A:E.32, A:E.32 CA.3: 5 residues within 4Å: Chain A: D.62, N.64, D.66, E.68, E.73 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.62, A:D.66, A:E.68, A:E.73, A:E.73 CA.5: 6 residues within 4Å: Chain B: S.19, E.22, G.23, D.24, K.27, E.32 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:S.19, B:E.22, B:D.24, B:K.27, B:E.32 CA.6: 5 residues within 4Å: Chain B: D.62, N.64, D.66, E.68, E.73 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:D.62, B:D.66, B:E.68, B:E.73, B:E.73

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ramagopal, U.A. et al., Structure of S100A4 with PCP. To be published

Release Date

2010-05-12

Peptides

Protein S100-A4: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Protein S100-A4

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