SMTL ID : 3m3m.2 (1 other biounit)

Crystal structure of glutathione S-transferase from Pseudomonas fluorescens [Pf-5]

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-dimer

Ligands

2 x GSH: GLUTATHIONE(Non-covalent)

GSH.1: 14 residues within 4Å: Chain A: S.12, N.14, I.36, T.41, G.53, K.54, I.55, P.56, E.68, S.69, Q.101, Y.167 Chain B: Y.102 Ligands: NA.2 15 PLIP interactions: 2 interactions with chain B, 13 interactions with chain A Hydrophobic interactions: B:Y.102, A:K.54 Hydrogen bonds: B:Y.102, A:I.55, A:I.55, A:E.68, A:S.69, A:Q.101, A:Q.101 Water bridges: A:K.54, A:K.54, A:K.54, A:E.68 Salt bridges: A:K.17, A:K.54 GSH.4: 14 residues within 4Å: Chain A: Y.102 Chain B: S.12, N.14, I.36, T.41, G.53, K.54, I.55, P.56, E.68, S.69, Q.101, Y.167 Ligands: NA.5 15 PLIP interactions: 14 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:K.54, A:Y.102 Hydrogen bonds: B:T.41, B:I.55, B:I.55, B:E.68, B:S.69, B:Q.101, B:Q.101 Water bridges: B:K.54, B:K.54, B:K.54, B:E.68 Salt bridges: B:K.17, B:K.54

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 6 residues within 4Å: Chain A: E.68, S.69, N.70, Q.101 Chain B: F.98 Ligands: GSH.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.68, A:N.70, A:Q.101 NA.5: 6 residues within 4Å: Chain A: F.98 Chain B: E.68, S.69, N.70, Q.101 Ligands: GSH.4 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:E.68, B:N.70

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 1 residues within 4Å: Chain A: Y.29 3 PLIP interactions: 3 interactions with chain A Water bridges: A:Y.29, A:Y.29, A:W.31 EDO.6: 1 residues within 4Å: Chain B: Y.29 3 PLIP interactions: 3 interactions with chain B Water bridges: B:Y.29, B:Y.29, B:W.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bagaria, A. et al., Crystal structure of glutathione S-transferase from Pseudomonas fluorescens [Pf-5]. To be Published

Release Date

2010-03-16

Peptides

Glutathione S-transferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Glutathione S-transferase

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