SMTL ID : 3m45.2 (1 other biounit)

Crystal structure of Ig1 domain of mouse SynCAM 2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.21 Å

Oligo State

homo-dimer

Ligands

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain A: N.15, Y.101 No protein-ligand interaction detected (PLIP) NAG.2: 2 residues within 4Å: Chain A: N.35 Chain B: R.57 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:R.57 Hydrophobic interactions: A:N.35 NAG.3: 2 residues within 4Å: Chain B: N.15, Y.101 1 PLIP interactions: 1 interactions with chain B Water bridges: B:Y.101 NAG.4: 2 residues within 4Å: Chain B: N.35, W.68 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.35

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fogel, A.I. et al., N-glycosylation at the SynCAM (synaptic cell adhesion molecule) immunoglobulin interface modulates synaptic adhesion. J.Biol.Chem. (2010)

Release Date

2010-09-08

Peptides

Cell adhesion molecule 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

Cell adhesion molecule 2

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