SMTL ID : 3m6k.2 (1 other biounit)

Crystal Structure of N-terminal 44 kDa fragment of topoisomerase V in the presence of guanidium hydrochloride

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

3 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 6 residues within 4Å: Chain A: D.310, C.314, C.338, P.339, D.340, L.341 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.310, A:D.340, A:D.340, A:D.340, A:D.340, A:L.341 PO4.2: 5 residues within 4Å: Chain A: R.108, R.131, R.293, S.322, S.324 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.322, A:S.324 Salt bridges: A:R.108, A:R.131, A:R.293 PO4.3: 5 residues within 4Å: Chain A: Y.107, R.131, R.144, E.215, Y.226 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.144, A:E.215, A:E.215, A:Y.226 Salt bridges: A:R.131

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rajan, R. et al., Structures of minimal catalytic fragments of topoisomerase v reveals conformational changes relevant for DNA binding. Structure (2010)

Release Date

2010-08-04

Peptides

Topoisomerase V: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Topoisomerase V

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