SMTL ID : 3m7r.1

Crystal structure of VDR H305Q mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x VDX: 5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL(Non-covalent)

VDX.1: 22 residues within 4Å: Chain A: Y.24, Y.28, F.31, L.57, L.60, L.63, V.64, S.67, I.101, R.104, S.105, S.108, W.116, C.118, Y.125, V.130, Q.135, L.139, L.143, H.227, Y.231, V.248 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:Y.24, A:F.31, A:L.57, A:L.60, A:L.63, A:L.63, A:W.116, A:Y.125, A:V.130, A:L.139, A:L.143, A:Y.231, A:V.248 Hydrogen bonds: A:Y.24, A:S.67, A:R.104, A:R.104, A:Q.135, A:Q.135

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rochel, N. et al., Crystal structure of hereditary vitamin D-resistant rickets--associated mutant H305Q of vitamin D nuclear receptor bound to its natural ligand. J.Steroid Biochem.Mol.Biol. (2010)

Release Date

2010-05-05

Peptides

Vitamin D3 receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Vitamin D3 receptor