- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.12 Å
- Oligo State
- homo-hexamer
- Ligands
- 8 x CA: CALCIUM ION(Non-covalent)
- 12 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.3: 7 residues within 4Å:- Chain A: Q.100, W.117, A.197, G.198, G.199, D.222, Q.326
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:Q.100, A:W.117
- Water bridges: A:Y.101, A:G.199
EDO.4: 5 residues within 4Å:- Chain A: G.135, W.136
- Chain C: K.249, T.250, R.252
2 PLIP interactions:1 interactions with chain A, 1 interactions with chain C- Water bridges: A:W.136, C:R.252
EDO.5: 4 residues within 4Å:- Chain A: P.96, Y.122, R.193, F.334
3 PLIP interactions:1 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:R.193
- Water bridges: B:K.64, B:K.64
EDO.7: 7 residues within 4Å:- Chain B: Q.100, W.117, A.197, G.198, G.199, D.222, Q.326
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:Q.100, B:W.117, B:G.198
- Water bridges: B:G.199
EDO.10: 7 residues within 4Å:- Chain C: Q.100, W.117, A.197, G.198, G.199, D.222, Q.326
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:Q.100, C:W.117, C:G.198
- Water bridges: C:G.199, C:D.222
EDO.11: 4 residues within 4Å:- Chain C: M.120, Y.122, R.193, F.334
3 PLIP interactions:2 interactions with chain C, 1 interactions with chain E- Hydrogen bonds: C:Y.122, C:R.193
- Water bridges: E:K.64
EDO.12: 4 residues within 4Å:- Chain C: K.328, K.331, K.332
- Chain E: H.62
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:K.332
EDO.16: 7 residues within 4Å:- Chain D: Q.100, W.117, A.197, G.198, G.199, D.222, Q.326
4 PLIP interactions:4 interactions with chain D- Hydrogen bonds: D:Q.100, D:W.117, D:G.198
- Water bridges: D:G.199
EDO.17: 3 residues within 4Å:- Chain D: Y.122, R.193, F.334
1 PLIP interactions:1 interactions with chain D- Hydrogen bonds: D:R.193
EDO.19: 6 residues within 4Å:- Chain E: Q.100, W.117, A.197, G.198, G.199, D.222
4 PLIP interactions:4 interactions with chain E- Hydrogen bonds: E:Q.100, E:W.117, E:G.198
- Water bridges: E:G.199
EDO.22: 7 residues within 4Å:- Chain F: Q.100, W.117, A.197, G.198, G.199, D.222, Q.326
5 PLIP interactions:5 interactions with chain F- Hydrogen bonds: F:Q.100, F:W.117, F:G.198
- Water bridges: F:G.199, F:D.222
EDO.23: 3 residues within 4Å:- Chain F: Y.122, R.193, F.334
1 PLIP interactions:1 interactions with chain F- Hydrogen bonds: F:R.193
- 3 x ACT: ACETATE ION(Non-functional Binders)
ACT.9: 9 residues within 4Å:- Chain A: Q.152, P.154, G.155, R.159
- Chain C: Q.152, P.154, G.155, F.156, R.159
7 PLIP interactions:4 interactions with chain C, 3 interactions with chain A- Hydrophobic interactions: C:F.156
- Hydrogen bonds: C:Q.152, C:G.155, A:Q.152, A:G.155
- Salt bridges: C:R.159, A:R.159
ACT.15: 9 residues within 4Å:- Chain B: Q.152, P.154, G.155, R.159
- Chain D: Q.152, P.154, G.155, F.156, R.159
8 PLIP interactions:4 interactions with chain B, 4 interactions with chain D- Hydrogen bonds: B:Q.152, B:Q.152, B:G.155, D:Q.152, D:G.155
- Salt bridges: B:R.159, D:R.159
- Hydrophobic interactions: D:F.156
ACT.21: 9 residues within 4Å:- Chain E: Q.152, P.154, G.155, R.159
- Chain F: Q.152, P.154, G.155, F.156, R.159
8 PLIP interactions:4 interactions with chain F, 4 interactions with chain E- Hydrophobic interactions: F:F.156
- Hydrogen bonds: F:Q.152, F:G.155, E:Q.152, E:Q.152, E:G.155
- Salt bridges: F:R.159, E:R.159
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Levisson, M. et al., Functional and structural characterization of a thermostable acetyl esterase from Thermotoga maritima. Proteins (2012)
- Release Date
- 2010-05-12
- Peptides
- Acetyl xylan esterase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.12 Å
- Oligo State
- homo-hexamer
- Ligands
- 8 x CA: CALCIUM ION(Non-covalent)
- 12 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 3 x ACT: ACETATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Levisson, M. et al., Functional and structural characterization of a thermostable acetyl esterase from Thermotoga maritima. Proteins (2012)
- Release Date
- 2010-05-12
- Peptides
- Acetyl xylan esterase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
F