SMTL ID : 3m94.1

Complex crystal structure of Ascaris suum eIF4E-3 with m2,2,7G cap

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

hetero-1-1-mer

Ligands

1 x M7M: N,N,7-trimethylguanosine 5'-(trihydrogen diphosphate)(Non-covalent)

M7M.1: 7 residues within 4Å: Chain A: W.22, M.67, W.68, E.69, N.121, R.123, K.128 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:W.68 Salt bridges: A:R.123, A:R.123, A:K.128, A:K.128 pi-Stacking: A:W.22, A:W.22, A:W.22, A:W.68, A:W.68

1 x ACE: ACETYL GROUP(Non-functional Binders)

ACE.2: 2 residues within 4Å: Chain B: R.1, I.2 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, W. et al., Structural basis for nematode eIF4E binding an m2,2,7G-Cap and its implications for translation initiation. Nucleic Acids Res. (2011)

Release Date

2011-07-20

Peptides

Translation initiation factor 4E: A
Eukaryotic translation initiation factor 4E-binding protein 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Translation initiation factor 4E

Eukaryotic translation initiation factor 4E-binding protein 1

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