SMTL ID : 3mad.1

Crystal structure of StSPL (symmetric form)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 8 residues within 4Å: Chain A: G.103, A.104, Y.106, K.312 Chain B: N.127, L.129, H.130, S.354 9 PLIP interactions: 5 interactions with chain B, 4 interactions with chain A Hydrogen bonds: B:N.127, B:S.354, B:S.354, A:A.104, A:Y.106 Water bridges: B:H.130, A:S.102 Salt bridges: B:H.130, A:K.318 PO4.2: 7 residues within 4Å: Chain A: N.127, H.130, S.354 Chain B: G.103, A.104, Y.106, K.312 5 PLIP interactions: 3 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:A.104, A:N.127 Water bridges: B:Y.106, B:Y.106 Salt bridges: A:H.130

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bourquin, F. et al., Structure and Function of Sphingosine-1-Phosphate Lyase, a Key Enzyme of Sphingolipid Metabolism. Structure (2010)

Release Date

2010-08-18

Peptides

Sphingosine-1-phosphate lyase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Sphingosine-1-phosphate lyase

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