SMTL ID : 3mcp.1

Crystal structure of Glucokinase (BDI_1628) from Parabacteroides distasonis ATCC 8503 at 3.00 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-dimer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: P.218, K.219, G.267, G.270 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.267 GOL.2: 5 residues within 4Å: Chain A: N.116, G.118, G.160, A.161, Y.179 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.118, A:A.161 GOL.4: 4 residues within 4Å: Chain B: P.218, K.219, G.267, G.270 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:G.267 GOL.5: 5 residues within 4Å: Chain B: N.116, G.118, G.160, A.161, Y.179 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:G.118, B:A.161

2 x FMT: FORMIC ACID(Non-functional Binders)

FMT.3: 7 residues within 4Å: Chain A: E.133, I.134, R.137, L.305, D.306, T.342, K.345 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.137, A:L.305, A:K.345 FMT.6: 7 residues within 4Å: Chain B: E.133, I.134, R.137, L.305, D.306, T.342, K.345 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:E.133, B:R.137, B:L.305, B:T.342, B:K.345

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of Glucokinase (BDI_1628) from Parabacteroides distasonis ATCC 8503 at 3.00 A resolution. To be published

Release Date

2010-05-12

Peptides

Glucokinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Glucokinase