Toggle navigation
Modelling
myWorkspace
Alignment Mode
User Template Mode
DeepView Project Mode
Modelling API
Template Library
Repository
SWISS-MODEL Repository
Repository API
3D-Beacons API
Annotation Projects
TBvar3D
Tools
Structure Assessment
Structure Comparison
QMEAN
Documentation
SWISS-MODEL
Examples
Video Tutorial
New Features
SWISS-MODEL Repository
QMEAN
Structure Assessment
Structure Comparison
TBvar3D
Protein Structure Course
References
Log in
Create Account
SMTL ID : 3mhg.1
(1 other biounit)
Dihydroxyacetone phosphate carbanion intermediate in tagatose-1,6-bisphosphate aldolase from Streptococcus pyogenes
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 1.92 Å
Oligo State
homo-dimer
Ligands
2 x
13P
:
1,3-DIHYDROXYACETONEPHOSPHATE
(Covalent)
13P.1:
14 residues within 4Å:
Chain A:
A.25
,
D.27
,
Q.28
,
L.68
,
K.125
,
E.163
,
K.205
,
L.248
,
S.249
,
A.250
,
L.275
,
C.276
,
G.277
,
R.278
14
PLIP interactions
:
14 interactions with chain A
Hydrophobic interactions:
A:A.25
,
A:K.205
Hydrogen bonds:
A:D.27
,
A:Q.28
,
A:S.249
,
A:S.249
,
A:S.249
,
A:A.250
,
A:G.277
,
A:R.278
Water bridges:
A:R.278
,
A:R.278
Salt bridges:
A:K.205
,
A:R.278
13P.5:
14 residues within 4Å:
Chain B:
A.25
,
D.27
,
Q.28
,
L.68
,
K.125
,
E.163
,
K.205
,
L.248
,
S.249
,
A.250
,
L.275
,
C.276
,
G.277
,
R.278
17
PLIP interactions
:
17 interactions with chain B
Hydrophobic interactions:
B:A.25
,
B:K.205
Hydrogen bonds:
B:D.27
,
B:Q.28
,
B:K.125
,
B:K.205
,
B:S.249
,
B:S.249
,
B:S.249
,
B:A.250
,
B:G.251
,
B:G.277
,
B:R.278
Water bridges:
B:R.278
,
B:R.278
Salt bridges:
B:K.205
,
B:R.278
4 x
CA
:
CALCIUM ION
(Non-functional Binders)
(Non-covalent)
CA.2:
0 residues within 4Å:
(No contacts)
No protein-ligand interaction detected (PLIP)
CA.3:
0 residues within 4Å:
(No contacts)
No protein-ligand interaction detected (PLIP)
CA.4:
2 residues within 4Å:
Chain A:
E.238
,
T.241
4
PLIP interactions
:
3 interactions with chain A
,
1 Ligand-Water interactions
Metal complexes:
A:E.238
,
A:E.238
,
A:T.241
,
H
2
O.14
CA.6:
1 residues within 4Å:
Chain B:
D.259
5
PLIP interactions
:
2 interactions with chain B
,
3 Ligand-Water interactions
Metal complexes:
B:D.259
,
B:D.259
,
H
2
O.26
,
H
2
O.37
,
H
2
O.43
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
LowKam, C. et al., Structure of a class I tagatose-1,6-bisphosphate aldolase: investigation into an apparent loss of stereospecificity. J.Biol.Chem. (2010)
Release Date
2010-04-28
Peptides
Tagatose 1,6-diphosphate aldolase 2:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
Export Alignment
FASTA format
Clustal Format
PNG Image
Secondary Structure
None
DSSP
PSIPRED
SSpro
Colour Scheme
Fade Mismatches
Enhance Mismatches
Chain
Unique Chain
Rainbow
2° Structure
Bfactor
Bfactor Range
SOA
Entropy
Clustal
Hydrophobic
Size
Charged
Polar
Proline
Ser/Thr
Cysteine
Aliphatic
Aromatic
No Colour
Background
3D Viewer
NGL
PV
2D
FASTA
Multi FASTA
ClustalW
PNG
Tagatose 1,6-diphosphate aldolase 2
Related Entries With Identical Sequence
3mhf.1
|
3mhf.2
|
3mhg.2
Cartoon
Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog
Background
Transparent
Resolution
Low
Medium
High
Extreme