SMTL ID : 3mk5.1

Crystal structure of 3,4-dihydroxy-2-butanone 4-phosphate synthase domain from Mycobacterium tuberculosis with sulfate and zinc at pH 4.00

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.06 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: R.147, G.149, H.150, T.151 Ligands: ZN.4 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:H.150, A:T.151, A:T.151 Water bridges: A:T.151 Salt bridges: A:R.147 SO4.2: 2 residues within 4Å: Chain A: K.140, R.146 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.140, A:R.146 SO4.3: 4 residues within 4Å: Chain A: R.99, N.100, G.101, I.102 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.100, A:G.101, A:I.102

2 x ZN: ZINC ION(Non-covalent)

ZN.4: 2 residues within 4Å: Chain A: H.150 Ligands: SO4.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.150 ZN.5: 1 residues within 4Å: Chain A: H.194 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.194, H2O.3

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Singh, M. et al., Structural basis for pH dependent monomer-dimer transition of 3,4-dihydroxy 2-butanone-4-phosphate synthase domain from Mycobacterium tuberculosis. J.Struct.Biol. (2011)

Release Date

2011-02-23

Peptides

3,4-dihydroxy-2-butanone 4-phosphate synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

3,4-dihydroxy-2-butanone 4-phosphate synthase