SMTL ID : 3mmg.1 (2 other biounits)

Crystal structure of tobacco vein mottling virus protease

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x GLU- THR- VAL- ARG- PHE- GLN- SER: Nuclear inclusion protein B fragment(Non-covalent)

GLU-THR-VAL-ARG-PHE-GLN-SER.1: 23 residues within 4Å: Chain A: L.32, H.46, R.49, D.81, T.146, K.147, D.148, G.149, A.151, H.167, S.168, L.169, T.170, H.171, T.172, N.177, F.203, W.210, F.213, T.214, L.215, V.216, E.217 28 PLIP interactions: 28 interactions with chain A Hydrophobic interactions: A:H.46, A:L.169, A:L.169, A:T.172, A:F.203, A:W.210, A:F.213, A:F.213, A:L.215 Hydrogen bonds: A:H.46, A:R.49, A:T.146, A:D.148, A:G.149, A:Q.150, A:A.151, A:S.168, A:T.170, A:T.170, A:H.171, A:T.172, A:T.214, A:T.214, A:V.216 Water bridges: A:R.49, A:R.49, A:R.49 Salt bridges: A:D.148

1 x FMT: FORMIC ACID(Non-functional Binders)

FMT.2: 6 residues within 4Å: Chain A: F.37, Q.96, K.97, L.98, K.99, V.187 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sun, P. et al., Structural determinants of tobacco vein mottling virus protease substrate specificity. Protein Sci. (2010)

Release Date

2010-10-20

Peptides

Nuclear inclusion protein A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Nuclear inclusion protein A

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