SMTL ID : 3mnq.1

Crystal structure of myosin-2 motor domain in complex with ADP-metavanadate and resveratrol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x AD9: ADP METAVANADATE

AD9.1: 21 residues within 4Å: Chain A: I.126, N.138, P.139, F.140, K.141, Y.146, E.191, S.192, G.193, A.194, G.195, K.196, T.197, E.198, N.244, N.246, S.247, S.248, S.467, G.468 Ligands: MG.2 25 PLIP interactions: 25 interactions with chain A Hydrogen bonds: A:N.138, A:Y.146, A:G.193, A:A.194, A:G.195, A:K.196, A:K.196, A:T.197, A:E.198, A:N.244, A:S.248, A:S.248, A:G.468 Water bridges: A:T.197, A:E.198, A:N.199, A:N.238, A:T.241, A:N.246, A:N.246, A:S.248, A:S.248, A:R.249, A:R.249 Salt bridges: A:K.196

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: T.197, S.248 Ligands: AD9.1 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:T.197, A:S.248, H2O.5, H2O.5

1 x STL: RESVERATROL(Non-covalent)

STL.3: 7 residues within 4Å: Chain A: K.240, T.242, N.245, T.285, K.672, Q.673, L.674 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Q.673, A:L.674 Hydrogen bonds: A:K.240, A:T.285

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 9 residues within 4Å: Chain A: F.250, G.251, L.273, I.466, S.467, I.482, T.485, N.486, Y.645 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.467, A:I.482, A:N.486 Water bridges: A:S.467 EDO.5: 1 residues within 4Å: Chain A: Q.82 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.82 Water bridges: A:S.70 EDO.6: 5 residues within 4Å: Chain A: L.273, L.274, K.276, F.477, E.478 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.274, A:K.276 Water bridges: A:L.274 EDO.7: 4 residues within 4Å: Chain A: L.442, K.446, N.627, I.628 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.446, A:K.446 Water bridges: A:Q.270, A:Q.270

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schneider, J. et al., Structural basis of resveratrol regulation of myosin activity. To be Published

Release Date

2011-04-27

Peptides

Myosin-2 heavy chain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Myosin-2 heavy chain