SMTL ID : 3mpk.1

Crystal Structure of Bordetella pertussis BvgS periplasmic VFT2 domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.04 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 9 residues within 4Å: Chain A: F.100, M.120, S.148, A.149, A.150, V.185, Q.186, T.187 Ligands: ACT.3 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:S.148, A:A.149, A:A.150, A:T.187 Water bridges: A:V.185, A:Q.186, A:Q.186, A:Q.186, A:S.190 GOL.4: 5 residues within 4Å: Chain A: V.101, N.102, S.103, A.149, L.153 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.102, A:S.103 Water bridges: A:A.104, A:P.213

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 5 residues within 4Å: Chain A: L.39, F.42, L.99, F.100, R.105 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.39, A:F.42, A:F.100 Hydrogen bonds: A:F.100 Water bridges: A:R.105, A:R.105 Salt bridges: A:R.105 ACT.3: 5 residues within 4Å: Chain A: F.100, V.145, P.169, Q.186 Ligands: GOL.1 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.100, A:P.169 Hydrogen bonds: A:Q.186, A:Q.186 Water bridges: A:V.145, A:S.190

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Herrou, J. et al., Periplasmic domain of the sensor-kinase BvgS reveals a new paradigm for the Venus flytrap mechanism. Proc.Natl.Acad.Sci.USA (2010)

Release Date

2010-10-06

Peptides

Virulence sensor protein bvgS: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Virulence sensor protein bvgS