SMTL ID : 3mss.2 (3 other biounits)

Abl kinase in complex with imatinib and fragment (FRAG2) in the myristate site

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x STI: 4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE(Non-covalent)

STI.1: 24 residues within 4Å: Chain A: L.26, Y.31, V.34, A.47, V.48, K.49, E.64, V.67, M.68, I.71, V.77, I.91, T.93, F.95, M.96, G.99, F.137, I.138, H.139, R.140, L.148, A.158, D.159, F.160 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.26, A:Y.31, A:A.47, A:I.71, A:I.91, A:T.93, A:L.148, A:D.159, A:F.160 Hydrogen bonds: A:E.64, A:T.93, A:M.96, A:D.159 pi-Stacking: A:Y.31

1 x MS7: O-benzyl-N-methyl-L-tyrosinamide(Non-covalent)

MS7.2: 8 residues within 4Å: Chain A: A.115, L.118, L.119, L.207, I.210, A.211, P.243, V.246 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.118, A:L.207, A:I.210, A:A.211, A:P.243, A:V.246

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jahnke, W. et al., Binding or bending: distinction of allosteric Abl kinase agonists from antagonists by an NMR-based conformational assay. J.Am.Chem.Soc. (2010)

Release Date

2010-05-26

Peptides

Tyrosine-protein kinase ABL1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Tyrosine-protein kinase ABL1

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