SMTL ID : 3msu.1

Crystal Structure of Citrate Synthase from Francisella tularensis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.84 Å

Oligo State

homo-dimer

Ligands

2 x OAA: OXALOACETATE ION(Non-covalent)

OAA.1: 7 residues within 4Å: Chain A: N.90, Y.91, R.92, R.113, I.116, Y.199, D.225 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Y.91, A:R.92, A:Y.199 Hydrogen bonds: A:Y.91, A:R.92, A:R.113, A:Y.199, A:D.225 Water bridges: A:R.92, A:A.200 Salt bridges: A:R.92, A:R.113 OAA.10: 9 residues within 4Å: Chain B: Y.91, R.92, C.95, F.112, R.113, I.116, I.117, G.198, Y.199 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:Y.91, B:R.92, B:Y.199 Hydrogen bonds: B:Y.199, B:D.225, B:D.225 Water bridges: B:R.92, B:R.113 Salt bridges: B:R.113

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 2 residues within 4Å: Chain A: C.123, H.125 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:C.123, A:H.125, H2O.8 ZN.9: 2 residues within 4Å: Chain B: C.123, H.125 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:C.123

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 4 residues within 4Å: Chain A: L.150, E.153, H.154, Y.254 Ligand excluded by PLIP

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 3 residues within 4Å: Chain A: H.125 Chain B: P.134, Q.135 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Salt bridges: A:H.125 Hydrogen bonds: B:Q.135 Water bridges: B:H.136 SO4.5: 3 residues within 4Å: Chain A: P.134, Q.135 Chain B: H.125 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:Q.135 Water bridges: A:M.133 Salt bridges: B:H.125 SO4.7: 3 residues within 4Å: Chain B: H.234, H.310, R.319 8 PLIP interactions: 8 interactions with chain B Water bridges: B:H.234, B:H.269, B:R.319, B:R.319, B:R.319 Salt bridges: B:H.234, B:H.310, B:R.319

1 x ACY: ACETIC ACID(Non-functional Binders)

ACY.6: 2 residues within 4Å: Chain B: N.90, R.92 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:N.90 Hydrogen bonds: B:N.90 Water bridges: B:R.92, B:R.113, B:R.113 Salt bridges: B:R.92

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.8: 4 residues within 4Å: Chain B: H.220, A.377, M.378, G.379 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:H.220 Water bridges: B:K.376, B:M.378, B:G.379

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Maltseva, N. et al., Crystal Structure of Citrate Synthase from Francisella tularensis. To be Published

Release Date

2010-05-26

Peptides

Citrate synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Citrate synthase