SMTL ID : 3muf.1

Shikimate kinase from Helicobacter pylori in complex with shikimate-3-phosphate and ADP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 16 residues within 4Å: Chain A: G.17, S.18, G.19, K.20, S.21, S.22, M.105, R.113, L.114, E.118, R.122, A.152, G.154, G.155, L.156 Ligands: S3P.2 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:G.17, A:S.18, A:G.19, A:K.20, A:S.21, A:S.22, A:E.118, A:E.118, A:R.122, A:A.152 Water bridges: A:S.159 Salt bridges: A:K.20, A:R.122

1 x S3P: SHIKIMATE-3-PHOSPHATE(Non-covalent)

S3P.2: 14 residues within 4Å: Chain A: M.16, K.20, D.39, V.50, F.62, R.63, G.85, G.86, G.87, R.122, P.123, L.124, R.138 Ligands: ADP.1 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:D.39, A:G.86 Water bridges: A:G.85, A:G.87, A:G.87 Salt bridges: A:K.20, A:R.63, A:R.122, A:R.138

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cheng, W.C. et al., Structures of Helicobacter pylori shikimate kinase reveal a selective inhibitor-induced-fit mechanism. Plos One (2012)

Release Date

2011-05-04

Peptides

Shikimate kinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Shikimate kinase

Related Entries With Identical Sequence