SMTL ID : 3muj.1

Early B-cell factor 3 (EBF3) IPT/TIG and dimerization helices

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.92 Å

Oligo State

homo-dimer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 7 residues within 4Å: Chain A: F.32, D.33, G.34, L.35, S.46, L.48, I.54 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.34, A:S.46 EDO.3: 7 residues within 4Å: Chain A: W.17, L.91, N.92, E.93, P.94, T.95, Y.98 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.92, A:N.92, A:T.95, A:T.95 EDO.4: 8 residues within 4Å: Chain A: S.12, P.13, T.23, I.25 Chain B: S.12, P.13, T.23, I.25 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:I.25, A:T.23

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: F.100, Q.104, R.116 Ligand excluded by PLIP CL.5: 1 residues within 4Å: Chain B: H.110 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Siponen, M.I. et al., Structural Determination of Functional Domains in Early B-cell Factor (EBF) Family of Transcription Factors Reveals Similarities to Rel DNA-binding Proteins and a Novel Dimerization Motif. J.Biol.Chem. (2010)

Release Date

2010-06-30

Peptides

Transcription factor COE3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Transcription factor COE3