SMTL ID : 3muk.1

Crystal structure of Brd4 bromodomain 1 with propionylated histone H3-K(prop)23

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x ALA- THR- PRK- ALA- ALA- ARG- LYS: peptide of Histone H3.3(Non-covalent)

ALA-THR-PRK-ALA-ALA-ARG-LYS.1: 14 residues within 4Å: Chain A: P.45, F.46, V.50, N.56, L.57, P.58, D.59, Y.60, Y.102, N.103, G.106, D.108, I.109, L.111 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:P.45, A:F.46, A:V.50, A:L.57, A:L.57, A:I.109, A:I.109 Hydrogen bonds: A:N.103, A:D.108 Water bridges: A:N.103, A:D.107

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 6 residues within 4Å: Chain A: I.63, I.64, K.65, T.66, N.98, I.101 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:I.63, A:K.65, A:T.66, A:T.66

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vollmuth, F. et al., Interaction of propionylated and butyrylated histone H3 lysine marks with Brd4 bromodomains. Angew.Chem.Int.Ed.Engl. (2010)

Release Date

2010-08-11

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

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