SMTL ID : 3mw7.1

Crystal structure of human orotidine 5'-monophosphate decarboxylase complexed with 5-fluoro-UMP(produced from 5-fluoro-6-amino-UMP)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.32 Å

Oligo State

homo-dimer

Ligands

2 x 5FU: 5-FLUORO-URIDINE-5'-MONOPHOSPHATE(Non-covalent)

5FU.1: 18 residues within 4Å: Chain A: S.89, D.91, K.113, H.115, D.144, K.146, M.203, S.204, I.233, P.249, Q.262, Y.264, V.281, G.282, R.283 Chain B: D.149, I.150, T.153 12 PLIP interactions: 3 interactions with chain B, 9 interactions with chain A Hydrogen bonds: B:D.149, B:T.153, B:T.153, A:S.89, A:K.113, A:S.204, A:S.204, A:Q.262, A:Y.264, A:G.282, A:R.283 Salt bridges: A:R.283 5FU.2: 18 residues within 4Å: Chain A: D.149, I.150, T.153 Chain B: S.89, D.91, K.113, H.115, D.144, K.146, M.203, S.204, I.233, P.249, Q.262, Y.264, V.281, G.282, R.283 15 PLIP interactions: 13 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:S.89, B:K.113, B:S.204, B:S.204, B:S.204, B:Q.262, B:Y.264, B:G.282, B:R.283, A:D.149, A:T.153 Water bridges: B:G.250, B:G.250, B:G.284 Salt bridges: B:R.283

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Y. et al., Crystal structure of human orotidine 5'-monophosphate decarboxylase complexed with 5-fluoro-UMP(produced from 5-fluoro-6-amino-UMP). To be Published

Release Date

2011-04-06

Peptides

Uridine 5'-monophosphate synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Uridine 5'-monophosphate synthase

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