SMTL ID : 3mwb.1 (1 other biounit)

The Crystal Structure of Prephenate dehydratase in complex with L-Phe from Arthrobacter aurescens to 2.0A

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-tetramer

Ligands

4 x PHE: PHENYLALANINE(Non-covalent)

PHE.1: 15 residues within 4Å: Chain A: N.229, L.230, S.231, R.232, I.233 Chain B: L.208, D.211, H.212, P.213, G.214, A.215, L.216, S.235, Y.245, F.247 16 PLIP interactions: 9 interactions with chain B, 1 Ligand-Ligand interactions, 6 interactions with chain A Hydrophobic interactions: B:L.208, B:L.216, B:L.216, B:F.247, A:L.230, A:I.233 Hydrogen bonds: B:G.214, B:A.215, B:L.216, F.1, A:N.229, A:N.229, A:N.229, A:L.230 pi-Stacking: B:Y.245, B:F.247 PHE.2: 15 residues within 4Å: Chain A: L.208, D.211, H.212, P.213, G.214, A.215, L.216, S.235, Y.245, F.247 Chain B: N.229, L.230, S.231, R.232, I.233 13 PLIP interactions: 10 interactions with chain A, 3 interactions with chain B, Hydrophobic interactions: A:L.208, A:L.216, A:L.216, A:F.247, B:L.230, B:I.233 Hydrogen bonds: A:D.211, A:G.214, A:A.215, A:L.216, B:L.230 pi-Stacking: A:Y.245, A:F.247 PHE.4: 15 residues within 4Å: Chain C: N.229, L.230, S.231, R.232, I.233 Chain D: L.208, D.211, H.212, P.213, G.214, A.215, L.216, S.235, Y.245, F.247 16 PLIP interactions: 6 interactions with chain C, 9 interactions with chain D, 1 Ligand-Ligand interactions Hydrophobic interactions: C:L.230, C:I.233, D:L.208, D:L.216, D:L.216, D:F.247 Hydrogen bonds: C:N.229, C:N.229, C:N.229, C:L.230, D:G.214, D:A.215, D:L.216, F.4 pi-Stacking: D:Y.245, D:F.247 PHE.5: 15 residues within 4Å: Chain C: L.208, D.211, H.212, P.213, G.214, A.215, L.216, S.235, Y.245, F.247 Chain D: N.229, L.230, S.231, R.232, I.233 13 PLIP interactions: 10 interactions with chain C, 3 interactions with chain D, Hydrophobic interactions: C:L.208, C:L.216, C:L.216, C:F.247, D:L.230, D:I.233 Hydrogen bonds: C:D.211, C:G.214, C:A.215, C:L.216, D:L.230 pi-Stacking: C:Y.245, C:F.247

2 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 4 residues within 4Å: Chain B: A.161, Q.164, P.165, L.167 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:A.161, B:Q.164, B:L.167 MG.6: 4 residues within 4Å: Chain D: A.161, Q.164, P.165, L.167 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:A.161, D:Q.164, D:L.167

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stein, A.J. et al., The Crystal Structure of Prephenate dehydratase in complex with L-Phe from Arthrobacter aurescens to 2.0A. To be Published

Release Date

2010-06-30

Peptides

Prephenate dehydratase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Prephenate dehydratase

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