SMTL ID : 3mwi.1

The complex crystal Structure of Urokianse and 5-nitro-1H-indole-2-amidine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.03 Å

Oligo State

monomer

Ligands

1 x B25: 5-nitro-1H-indole-2-carboximidamide(Non-covalent)

B25.1: 12 residues within 4Å: Chain A: S.193, Q.195, S.198, V.216, S.217, W.218, G.219, P.228, G.229, V.230, Y.231 Ligands: SO4.2 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.193, A:S.198, A:S.217, A:W.218, A:P.228, A:V.230 Water bridges: A:Y.173

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: H.46, Q.195, G.196, S.198 Ligands: B25.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.196, A:S.198, A:S.198 Salt bridges: A:H.46 SO4.3: 3 residues within 4Å: Chain A: Q.169, P.170, H.171 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.171 Salt bridges: A:H.171

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jiang, L.G. et al., The complex crystal Structure of Urokianse and 5-nitro-1H-indole-2-amidine. To be Published

Release Date

2011-06-01

Peptides

Urokinase-type plasminogen activator: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
U

Urokinase-type plasminogen activator