SMTL ID : 3mxg.2 (1 other biounit)

Structure of Shiga Toxin type 2 (Stx2) B Pentamer Mutant Q40L

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.49 Å

Oligo State

homo-pentamer

Ligands

3 x XLS: D-xylose(Non-covalent)

XLS.1: 4 residues within 4Å: Chain A: R.32, W.33, N.34 Chain B: W.33 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:W.33, A:N.34, A:N.34 XLS.2: 5 residues within 4Å: Chain A: E.64 Chain B: K.12, N.14, D.16, T.18 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.12, B:D.16 XLS.3: 3 residues within 4Å: Chain C: D.16, T.18, W.29 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:T.18, C:T.18, C:T.18

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Conrady, D.G. et al., Molecular basis of differential B-pentamer stability of Shiga toxins 1 and 2. Plos One (2010)

Release Date

2011-01-12

Peptides

Shiga-like toxin 2 subunit B: ABCDE

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

C
D

D
E

E
F

Shiga-like toxin 2 subunit B

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