SMTL ID : 3mzw.1

HER2 extracelluar region with affinity matured 3-helix affibody ZHER2:342

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 7 residues within 4Å: Chain A: Q.32, Q.56, L.231, A.232, C.233, N.237, G.240 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.32, A:Q.56

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 2 residues within 4Å: Chain A: T.45, N.46 No protein-ligand interaction detected (PLIP) NAG.3: 4 residues within 4Å: Chain A: Q.546, P.547, Q.548, N.549 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.549

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eigenbrot, C. et al., Structural basis for high-affinity HER2 receptor binding by an engineered protein. Proc.Natl.Acad.Sci.USA (2010)

Release Date

2010-07-28

Peptides

Tyrosine kinase-type cell surface receptor HER2: A
Immunoglobulin G-binding protein A: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Tyrosine kinase-type cell surface receptor HER2

Immunoglobulin G-binding protein A

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