SMTL ID : 3n07.1 (4 other biounits)

Structure of putative 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase from Vibrio cholerae

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.76 Å

Oligo State

homo-tetramer

Ligands

4 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: D.31, D.33, D.124 6 PLIP interactions: 3 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.31, A:D.33, A:D.124, H2O.2, H2O.3, H2O.4 MG.2: 3 residues within 4Å: Chain B: D.31, D.33, D.124 6 PLIP interactions: 3 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:D.31, B:D.33, B:D.124, H2O.5, H2O.5, H2O.6 MG.3: 3 residues within 4Å: Chain C: D.31, D.33, D.124 6 PLIP interactions: 3 interactions with chain C, 3 Ligand-Water interactions Metal complexes: C:D.31, C:D.33, C:D.124, H2O.8, H2O.8, H2O.10 MG.4: 3 residues within 4Å: Chain D: D.31, D.33, D.124 5 PLIP interactions: 2 interactions with chain D, 3 Ligand-Water interactions Metal complexes: D:D.33, D:D.124, H2O.10, H2O.11, H2O.13

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Daughtry, K.D. et al., Structural basis for the divergence of substrate specificity and biological function within HAD phosphatases in lipopolysaccharide and sialic acid biosynthesis. Biochemistry (2013)

Release Date

2010-08-04

Peptides

3-deoxy-D-manno-octulosonate 8-phosphate phosphatase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

3-deoxy-D-manno-octulosonate 8-phosphate phosphatase

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