SMTL ID : 3n3d.1

Crystal structure of geranylgeranyl pyrophosphate synthase from lactobacillus brevis atcc 367

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: K.49, R.52, H.82, R.99, Y.213 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:R.99, A:Y.213 Water bridges: A:R.52, A:Y.213 Salt bridges: A:K.49, A:R.52, A:H.82 SO4.2: 3 residues within 4Å: Chain A: Q.34, H.37, H.38 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.34 Salt bridges: A:H.37, A:H.38 SO4.3: 6 residues within 4Å: Chain A: R.5, K.45, S.46, G.47, G.48, K.49 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.5, A:G.48, A:K.49 Salt bridges: A:R.5 SO4.4: 5 residues within 4Å: Chain A: H.252, A.253, P.254, R.255, D.256 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.255, A:D.256, A:D.256 Salt bridges: A:R.255 SO4.5: 5 residues within 4Å: Chain B: K.49, L.51, R.52, H.82, Y.213 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:Y.213 Water bridges: B:R.52 Salt bridges: B:K.49, B:R.52, B:H.82

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Patskovsky, Y. et al., Crystal Structure of Geranylgeranyl Pyrophosphate Synthase from Lactobacillus Brevis. To be Published

Release Date

2010-06-02

Peptides

Geranylgeranyl pyrophosphate synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Geranylgeranyl pyrophosphate synthase